Evaluation of Convolutionary Neural Networks Modeling of DNA Sequences using Ordinal versus one-hot Encoding Method

• Main Authors: Choong, Allen Chieng Hoon, Lee, Nung Kion
• 格式: Article
• 语言: English
• 出版: IEEE 2018
• 主题: Q Science (General); QA75 Electronic computers. Computer science; T Technology (General)
• 在线阅读: http://ir.unimas.my/id/eprint/19014/1/encoding1.pdf; http://ir.unimas.my/id/eprint/19014/; https://ieeexplore.ieee.org/abstract/document/8270400

Convolutionary neural network (CNN) is a popular choice for supervised DNA motif prediction due to its very high performance. To employ CNN, the input DNA sequences are required to be encoded as numerical values and represented as either vectors or multi-dimensional matrices. This paper evaluates a...