Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)

Staphylococcus aureus biofilm associated infections remains a major clinical concern in patients with indwelling devices. Quantitative real-time PCR (qPCR) can be used to investigate the pathogenic role of such biofilms. We describe qPCRs for 12 adhesion and biofilm-related genes of four S. aureus i...

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主要な著者: Atshan, Salman Sahab, Shamsudin, Mariana Nor, Karunanidhi, Arunkumar, Belkum, Alex van, Lung, Leslie Than Thian, Sekawi, Zamberi, Nathan, Jayakayatri Jeevajothi, Ling, King Hwa, Seng, Johnson Shueh Chong, Alreshidi, Mateq Ali, Abduljaleel, Salwa A., Awang Hamat, Rukman
フォーマット: 論文
出版事項: Elsevier 2013
オンライン・アクセス:http://psasir.upm.edu.my/id/eprint/29540/
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spelling my.upm.eprints.295402015-12-08T03:56:51Z http://psasir.upm.edu.my/id/eprint/29540/ Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA) Atshan, Salman Sahab Shamsudin, Mariana Nor Karunanidhi, Arunkumar Belkum, Alex van Lung, Leslie Than Thian Sekawi, Zamberi Nathan, Jayakayatri Jeevajothi Ling, King Hwa Seng, Johnson Shueh Chong Alreshidi, Mateq Ali Abduljaleel, Salwa A. Awang Hamat, Rukman Staphylococcus aureus biofilm associated infections remains a major clinical concern in patients with indwelling devices. Quantitative real-time PCR (qPCR) can be used to investigate the pathogenic role of such biofilms. We describe qPCRs for 12 adhesion and biofilm-related genes of four S. aureus isolates which were applied during in vitro biofilm development. An endogenous control (16S rRNA) was used for signal normalization. We compared the qPCR results with structural analysis using scanning electron microscopy (SEM). The SEM studies showed different cellular products surrounding the aggregated cells at different times of biofilm formation. Using qPCR, we found that expression levels of the gene encoding fibronectin binding protein A and B and clumping factor B (fnbA/B and clfB), which involves in primary adherence of S. aureus, were significantly increased at 24h and decreased slightly and variably at 48 h when all 4 isolates were considered. The elastin binding protein (ebps) RNA expression level was significantly enhanced more than 6-fold at 24 and 48 h compared to 12h. Similar results were obtained for the intercellular adhesion biofilm required genes type C (icaC). In addition, qPCR revealed a fluctuation in expression levels at different time points of biofilm growth of other genes, indicating that different parameter modes of growth processes are operating at different times. Elsevier 2013-08 Article PeerReviewed Atshan, Salman Sahab and Shamsudin, Mariana Nor and Karunanidhi, Arunkumar and Belkum, Alex van and Lung, Leslie Than Thian and Sekawi, Zamberi and Nathan, Jayakayatri Jeevajothi and Ling, King Hwa and Seng, Johnson Shueh Chong and Alreshidi, Mateq Ali and Abduljaleel, Salwa A. and Awang Hamat, Rukman (2013) Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA). Infection, Genetics and Evolution, 18. pp. 106-112. ISSN 1567-1348; ESSN: 1567-7257 10.1016/j.meegid.2013.05.002
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
description Staphylococcus aureus biofilm associated infections remains a major clinical concern in patients with indwelling devices. Quantitative real-time PCR (qPCR) can be used to investigate the pathogenic role of such biofilms. We describe qPCRs for 12 adhesion and biofilm-related genes of four S. aureus isolates which were applied during in vitro biofilm development. An endogenous control (16S rRNA) was used for signal normalization. We compared the qPCR results with structural analysis using scanning electron microscopy (SEM). The SEM studies showed different cellular products surrounding the aggregated cells at different times of biofilm formation. Using qPCR, we found that expression levels of the gene encoding fibronectin binding protein A and B and clumping factor B (fnbA/B and clfB), which involves in primary adherence of S. aureus, were significantly increased at 24h and decreased slightly and variably at 48 h when all 4 isolates were considered. The elastin binding protein (ebps) RNA expression level was significantly enhanced more than 6-fold at 24 and 48 h compared to 12h. Similar results were obtained for the intercellular adhesion biofilm required genes type C (icaC). In addition, qPCR revealed a fluctuation in expression levels at different time points of biofilm growth of other genes, indicating that different parameter modes of growth processes are operating at different times.
format Article
author Atshan, Salman Sahab
Shamsudin, Mariana Nor
Karunanidhi, Arunkumar
Belkum, Alex van
Lung, Leslie Than Thian
Sekawi, Zamberi
Nathan, Jayakayatri Jeevajothi
Ling, King Hwa
Seng, Johnson Shueh Chong
Alreshidi, Mateq Ali
Abduljaleel, Salwa A.
Awang Hamat, Rukman
spellingShingle Atshan, Salman Sahab
Shamsudin, Mariana Nor
Karunanidhi, Arunkumar
Belkum, Alex van
Lung, Leslie Than Thian
Sekawi, Zamberi
Nathan, Jayakayatri Jeevajothi
Ling, King Hwa
Seng, Johnson Shueh Chong
Alreshidi, Mateq Ali
Abduljaleel, Salwa A.
Awang Hamat, Rukman
Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
author_facet Atshan, Salman Sahab
Shamsudin, Mariana Nor
Karunanidhi, Arunkumar
Belkum, Alex van
Lung, Leslie Than Thian
Sekawi, Zamberi
Nathan, Jayakayatri Jeevajothi
Ling, King Hwa
Seng, Johnson Shueh Chong
Alreshidi, Mateq Ali
Abduljaleel, Salwa A.
Awang Hamat, Rukman
author_sort Atshan, Salman Sahab
title Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
title_short Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
title_full Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
title_fullStr Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
title_full_unstemmed Quantitative PCR analysis of genes expressed during biofilm development of methicillin resistant Staphylococcus aureus (MRSA)
title_sort quantitative pcr analysis of genes expressed during biofilm development of methicillin resistant staphylococcus aureus (mrsa)
publisher Elsevier
publishDate 2013
url http://psasir.upm.edu.my/id/eprint/29540/
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score 13.252575